ENSDARG00000057890


Danio rerio

Features
Gene ID: ENSDARG00000057890
  
Biological name :si:dkey-33c12.4
  
Synonyms : si:dkey-33c12.4
  
Possible biological names infered from orthology : Q49AM3 / tetratricopeptide repeat domain 31 / TTC31
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 9339919
Gene end: 9368535
  
Corresponding Affymetrix probe sets: Dr.25337.1.S1_at (Zebrafish Array)   Dr.25337.2.S1_a_at (Zebrafish Array)   Dr.4358.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000077797
Ensembl peptide - ENSDARP00000117541
NCBI entrez gene - 560112     See in Manteia.
RefSeq - XM_021480594
swissprot - B8A5A0
swissprot - B8A599
ZFIN ID - ZDB-GENE-030131-2527
Ensembl - ENSDARG00000057890
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TTC31ENSG00000115282Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:123010ENSDARG0000003908218
stip1 / stress-induced phosphoprotein 1 / P31948* / Q60864*ENSDARG0000000490613


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR000571  Zinc finger, CCCH-type
 IPR009060  UBA-like superfamily
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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