ENSDARG00000058047


Danio rerio

Features
Gene ID: ENSDARG00000058047
  
Biological name :pafah1b3
  
Synonyms : pafah1b3 / platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit
  
Possible biological names infered from orthology : platelet activating factor acetylhydrolase 1b catalytic subunit 3 / Platelet-activating factor acetylhydrolase IB subunit gamma / Q15102 / Q61205
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 11773395
Gene end: 11779661
  
Corresponding Affymetrix probe sets: Dr.10814.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000121036
Ensembl peptide - ENSDARP00000153820
Ensembl peptide - ENSDARP00000060144
Ensembl peptide - ENSDARP00000120580
NCBI entrez gene - 394033     See in Manteia.
RefSeq - NM_201058
RefSeq Peptide - NP_957352
swissprot - E9QCS6
swissprot - Q7ZTU4
ZFIN ID - ZDB-GENE-040426-1026
Ensembl - ENSDARG00000058047
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q15102ENSG00000079462Homo sapiens
 Q61205ENSMUSG00000005447Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pafah1b3 / platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit / Q15102* / Q61205* / Platelet-activating factor acetylhydrolase IB subunit gamma * / platelet activating fa...ENSDARG0000010533671
pafah1b2 / platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 / P68402* / Q61206* / Platelet-activating factor acetylhydrolase IB subunit beta *ENSDARG0000003535247


Protein motifs (from Interpro)
Interpro ID Name
 IPR013830  SGNH hydrolase-type esterase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007420 brain development IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0047179 platelet-activating factor acetyltransferase activity IBA


Pathways (from Reactome)
Pathway description
COPI-independent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000032013 Q7T394 / pafah1b1a / platelet-activating factor acetylhydrolase 1b, regulatory subunit 1a / P43034* / P63005* / PAFAH1B1* / platelet-activating factor acetylhydrolase, isoform 1b, subunit 1...  / complex
 ENSDARG00000035352 pafah1b2 / platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 / P68402* / Q61206* / Platelet-activating factor acetylhydrolase IB subunit beta *  / complex






 

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