ENSG00000079462


Homo sapiens

Features
Gene ID: ENSG00000079462
  
Biological name :PAFAH1B3
  
Synonyms : PAFAH1B3 / platelet activating factor acetylhydrolase 1b catalytic subunit 3 / Q15102
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: q13.2
Gene start: 42297033
Gene end: 42303546
  
Corresponding Affymetrix probe sets: 203228_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000472950
Ensembl peptide - ENSP00000471933
Ensembl peptide - ENSP00000473065
Ensembl peptide - ENSP00000262890
Ensembl peptide - ENSP00000444935
Ensembl peptide - ENSP00000469352
Ensembl peptide - ENSP00000470753
NCBI entrez gene - 5050     See in Manteia.
OMIM - 603074
RefSeq - XM_017026848
RefSeq - NM_001145939
RefSeq - NM_001145940
RefSeq - NM_002573
RefSeq - XM_017026846
RefSeq - XM_017026847
RefSeq Peptide - NP_001139411
RefSeq Peptide - NP_001139412
RefSeq Peptide - NP_002564
swissprot - M0QXS6
swissprot - M0QZT2
swissprot - M0R1K3
swissprot - M0R323
swissprot - M0R389
swissprot - Q15102
swissprot - A0A024R0L6
Ensembl - ENSG00000079462
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pafah1b3ENSDARG00000105336Danio rerio
 pafah1b3ENSDARG00000058047Danio rerio
 Q61205ENSMUSG00000005447Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P68402 / PAFAH1B2 / platelet activating factor acetylhydrolase 1b catalytic subunit 2ENSG0000016809258


Protein motifs (from Interpro)
Interpro ID Name
 IPR013830  SGNH hydrolase-type esterase domain
 IPR036514  SGNH hydrolase superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process TAS
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0007399 nervous system development TAS
 biological_processGO:0007420 brain development IBA
 biological_processGO:0016042 lipid catabolic process IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003847 1-alkyl-2-acetylglycerophosphocholine esterase activity IEA
 molecular_functionGO:0004623 phospholipase A2 activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0046982 protein heterodimerization activity IEA
 molecular_functionGO:0047179 platelet-activating factor acetyltransferase activity IBA


Pathways (from Reactome)
Pathway description
COPI-independent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000007168 P43034 / PAFAH1B1 / platelet activating factor acetylhydrolase 1b regulatory subunit 1  / complex
 ENSG00000168092 P68402 / PAFAH1B2 / platelet activating factor acetylhydrolase 1b catalytic subunit 2  / complex






 

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