ENSDARG00000058140


Danio rerio

Features
Gene ID: ENSDARG00000058140
  
Biological name :ttc25
  
Synonyms : tetratricopeptide repeat domain 25 / ttc25
  
Possible biological names infered from orthology : Q96NG3 / Q9D4B2
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 17910569
Gene end: 17928233
  
Corresponding Affymetrix probe sets: Dr.12484.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000075390
NCBI entrez gene - 393286     See in Manteia.
RefSeq - NM_200316
RefSeq Peptide - NP_956610
swissprot - F1RBQ8
ZFIN ID - ZDB-GENE-040426-995
Ensembl - ENSDARG00000058140
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TTC25ENSGALG00000003464Gallus gallus
 TTC25ENSG00000204815Homo sapiens
 Ttc25ENSMUSG00000006784Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle cilium decreased length , abnormal
Kupffers vesicle cilium decreased amount , abnormal
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 ZFA:0000008 brain brain hydrocephalic , abnormal
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 ZFA:0000150 pronephric duct pronephric duct motile cilium disorganized , abnormal
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 ZFA:0000151 pronephros pronephros cystic , abnormal
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 ZFA:0001115 trunk trunk curved , abnormal
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 ZFA:0001261 ventricular system ventricular system dilated , abnormal
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 ZFA:0001617 otolith otolith morphology , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr