ENSDARG00000058327


Danio rerio

Features
Gene ID: ENSDARG00000058327
  
Biological name :neu3.3
  
Synonyms : neu3.3 / sialidase 3 (membrane sialidase), tandem duplicate 3
  
Possible biological names infered from orthology : NEU3 / neuraminidase 3 / Q9JMH7 / Q9UQ49
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 21803363
Gene end: 21809107
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000079035
Ensembl peptide - ENSDARP00000155965
Ensembl peptide - ENSDARP00000075627
NCBI entrez gene - 555206     See in Manteia.
RefSeq - NM_001077538
RefSeq Peptide - NP_001071006
swissprot - A0JMM3
ZFIN ID - ZDB-GENE-061103-511
Ensembl - ENSDARG00000058327
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NEU3ENSGALG00000028960Gallus gallus
 NEU3ENSG00000162139Homo sapiens
 Neu3ENSMUSG00000035239Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
neu3.4 / sialidase 3 (membrane sialidase), tandem duplicate 4 / NEU3* / Q9JMH7* / Q9UQ49* / neuraminidase 3*ENSDARG0000009638176
neu3.2 / sialidase 3 (membrane sialidase), tandem duplicate 2 / NEU3* / Q9JMH7* / Q9UQ49* / neuraminidase 3*ENSDARG0000001004756
neu3.5 / sialidase 3 (membrane sialidase), tandem duplicate 5 / NEU3* / Q9JMH7* / Q9UQ49* / neuraminidase 3*ENSDARG0000009636856
neu3.1 / sialidase 3 (membrane sialidase), tandem duplicate 1 / NEU3* / Q9JMH7* / Q9UQ49* / neuraminidase 3*ENSDARG0000009638249
neu4 / sialidase 4 / Q8BZL1* / Q8WWR8* / neuraminidase 4*ENSDARG0000005767743


Protein motifs (from Interpro)
Interpro ID Name
 IPR011040  Sialidase
 IPR026856  Sialidase family
 IPR026944  Sialidase-3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001573 ganglioside metabolic process IDA
 biological_processGO:0006689 ganglioside catabolic process IBA
 biological_processGO:0009313 oligosaccharide catabolic process IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0016020 membrane IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IBA
 molecular_functionGO:0004308 exo-alpha-sialidase activity IDA


Pathways (from Reactome)
Pathway description
Glycosphingolipid metabolism
Sialic acid metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr