ENSDARG00000058561


Danio rerio

Features
Gene ID: ENSDARG00000058561
  
Biological name :fbxo30a
  
Synonyms : F-box protein 30a / fbxo30a
  
Possible biological names infered from orthology : F-box only protein 30 / F-box protein 30 / FBXO30 / Q8BJL1 / Q8TB52
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 7620220
Gene end: 7628458
  
Corresponding Affymetrix probe sets: Dr.18454.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000075888
NCBI entrez gene - 100001417     See in Manteia.
RefSeq - NM_201151
RefSeq Peptide - NP_957445
swissprot - F1QQR6
ZFIN ID - ZDB-GENE-040426-1215
Ensembl - ENSDARG00000058561
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FBXO30ENSGALG00000041684Gallus gallus
 FBXO30ENSG00000118496Homo sapiens
 Fbxo30ENSMUSG00000047648Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fbxo30b / F-box protein 30bENSDARG0000001931151
fbxo40.2 / F-box protein 40, tandem duplicate 2 / FBXO40* / P62932* / Q9UH90* / F-box protein 40* / Mus musculus F-box protein 40 (Fbxo40), transcript variant 1, mRNA.*ENSDARG0000009111930
fbxo40.1 / F-box protein 40, tandem duplicate 1 / FBXO40* / P62932* / Q9UH90* / F-box protein 40* / Mus musculus F-box protein 40 (Fbxo40), transcript variant 1, mRNA.*ENSDARG0000006977529


Protein motifs (from Interpro)
Interpro ID Name
 IPR001293  Zinc finger, TRAF-type
 IPR001810  F-box domain
 IPR008974  TRAF-like
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR031890  F-box only protein 30/40


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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