ENSDARG00000058719


Danio rerio

Features
Gene ID: ENSDARG00000058719
  
Biological name :si:dkey-119f1.1
  
Synonyms : si:dkey-119f1.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 6321623
Gene end: 6373829
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000076074
NCBI entrez gene - 557127     See in Manteia.
swissprot - A5PN27
ZFIN ID - ZDB-GENE-070705-287
Ensembl - ENSDARG00000058719
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
smc6 / structural maintenance of chromosomes 6 / Q924W5* / Q96SB8* / Structural maintenance of chromosomes protein 6 *ENSDARG0000009182144


Protein motifs (from Interpro)
Interpro ID Name
 IPR003395  RecF/RecN/SMC, N-terminal
 IPR027132  Structural maintenance of chromosomes protein 6
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000724 double-strand break repair via homologous recombination IEA
 biological_processGO:0006281 DNA repair IEA
 cellular_componentGO:0030915 Smc5-Smc6 complex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
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contact: otassy@igbmc.fr