ENSDARG00000091821


Danio rerio

Features
Gene ID: ENSDARG00000091821
  
Biological name :smc6
  
Synonyms : smc6 / structural maintenance of chromosomes 6
  
Possible biological names infered from orthology : Q924W5 / Q96SB8 / Structural maintenance of chromosomes protein 6
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 6667441
Gene end: 6746046
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129417
Ensembl peptide - ENSDARP00000154579
Ensembl peptide - ENSDARP00000110583
NCBI entrez gene - 797304     See in Manteia.
RefSeq - XM_001337740
RefSeq - XM_005158589
swissprot - E7F8G9
ZFIN ID - ZDB-GENE-110303-1
Ensembl - ENSDARG00000091821
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SMC6ENSGALG00000016467Gallus gallus
 SMC6ENSG00000163029Homo sapiens
 Smc6ENSMUSG00000020608Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-119f1.1ENSDARG0000005871943


Protein motifs (from Interpro)
Interpro ID Name
 IPR003395  RecF/RecN/SMC, N-terminal
 IPR027132  Structural maintenance of chromosomes protein 6
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000724 double-strand break repair via homologous recombination IEA
 biological_processGO:0006281 DNA repair IEA
 cellular_componentGO:0030915 Smc5-Smc6 complex IEA


Pathways (from Reactome)
Pathway description
SUMOylation of DNA damage response and repair proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
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