ENSDARG00000058969


Danio rerio

Features
Gene ID: ENSDARG00000058969
  
Biological name :cntnap2a
  
Synonyms : cntnap2a / contactin associated protein like 2a
  
Possible biological names infered from orthology : CNTNAP2 / contactin associated protein like 2 / Q9CPW0 / Q9UHC6
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 17417150
Gene end: 18179535
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000146773
Ensembl peptide - ENSDARP00000154768
Ensembl peptide - ENSDARP00000128341
Ensembl peptide - ENSDARP00000128907
Ensembl peptide - ENSDARP00000143321
NCBI entrez gene - 559157     See in Manteia.
swissprot - A0A286Y870
swissprot - L7NKH5
swissprot - X1WDP2
swissprot - X1WFA3
ZFIN ID - ZDB-GENE-120328-3
Ensembl - ENSDARG00000058969
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CNTNAP2ENSGALG00000031971Gallus gallus
 Q9UHC6ENSG00000174469Homo sapiens
 Q9CPW0ENSMUSG00000039419Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cntnap2b / contactin associated protein like 2b / Q9CPW0* / Q9UHC6* / CNTNAP2* / contactin associated protein like 2*ENSDARG0000007455873
cntnap3 / contactin associated protein like 3ENSDARG0000006782437
cntnap1 / contactin associated protein 1 / O54991* / P78357*ENSDARG0000007452434
cntnap5b / contactin associated protein-like 5b / Q0V8T7* / Q0V8T9* / Q8WYK1* / Q0V8T8* / CNTNAP5* / Cntnap5c* / Cntnap5a* / contactin associated protein like 5* / Contactin-associated prot...ENSDARG0000007518929
cntnap5a / contactin associated protein-like 5a / Q0V8T7* / Q0V8T9* / Q8WYK1* / Q0V8T8* / CNTNAP5* / Cntnap5c* / Cntnap5b* / contactin associated protein like 5* / Contactin-associated prot...ENSDARG0000007392028
cntnap5l / contactin associated protein-like 5 like / Q0V8T7* / Q0V8T8* / Q8WYK1* / Q0V8T9* / CNTNAP5* / Cntnap5c* / Cntnap5a* / Cntnap5b* / contactin associated protein like 5* / Contactin...ENSDARG0000007380228
nrxn3b / neurexin 3b / NRXN3* / Q6P9K9* / Q9Y4C0* / Q8C985* / Q9HDB5* / neurexin 3*ENSDARG0000006269318
nrxn2b / neurexin 2b / NRXN2* / P58401* / Q9P2S2* / neurexin 2* / neurexin II*ENSDARG0000006315017
nrxn1b / neurexin 1bENSDARG0000006363516
A1XQX0 / A1XQX1 / nrxn1a / neurexin 1aENSDARG0000006164716
nrxn2a / neurexin 2aENSDARG0000006145416
neurexin 2 / NRXN2 (1 of many) / NRXN2* / P58401* / Q9P2S2*ENSDARG000001131121
nrxn3a / neurexin 3a / NRXN3* / Q6P9K9* / Q9Y4C0* / Q8C985* / Q9HDB5* / neurexin 3*ENSDARG000000437461


Protein motifs (from Interpro)
Interpro ID Name
 IPR000421  Coagulation factor 5/8 C-terminal domain
 IPR000742  EGF-like domain
 IPR001791  Laminin G domain
 IPR002181  Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
 IPR003585  Neurexin/syndecan/glycophorin C
 IPR008979  Galactose-binding-like domain superfamily
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR029831  Contactin-associated protein-like 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0071205 protein localization to juxtaparanode region of axon IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000100 cerebellum cerebellum has fewer parts of type GABAergic neuron , abnormal
Show

 ZFA:0000109 forebrain forebrain has fewer parts of type GABAergic neuron , abnormal
Show

 ZFA:0000250 opercle opercle shape , abnormal
opercle increased width , abnormal
Show

 ZFA:0000814 opercular lateral line neuromast opercular lateral line neuromast premature , abnormal
opercular lateral line neuromast mislocalised dorsally , abnormal
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 ZFA:0001094 whole organism whole organism absent , abnormal
whole organism behavioural activity , abnormal
Show

 ZFA:0001391 anterior lateral line ganglion anterior lateral line ganglion absent , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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