ENSDARG00000059075


Danio rerio

Features
Gene ID: ENSDARG00000059075
  
Biological name :nip7
  
Synonyms : nip7 / NIP7, nucleolar pre-rRNA processing protein / Q503P2
  
Possible biological names infered from orthology : 60S ribosome subunit biosis / Q9CXK8 / Q9Y221
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 5843583
Gene end: 5850683
  
Corresponding Affymetrix probe sets: Dr.16108.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000076524
NCBI entrez gene - 553616     See in Manteia.
swissprot - B2GR20
swissprot - Q503P2
ZFIN ID - ZDB-GENE-050522-256
Ensembl - ENSDARG00000059075
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NIP7ENSGALG00000000650Gallus gallus
 NIP7ENSG00000132603Homo sapiens
 Nip7ENSMUSG00000031917Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002478  PUA domain
 IPR005155  Ribosome biogenesis factor NIP7-like
 IPR015947  PUA-like superfamily
 IPR016686  Ribosome biogenesis factor, NIP7


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0042255 ribosome assembly IEA
 biological_processGO:0042273 ribosomal large subunit biogenesis IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0030687 preribosome, large subunit precursor IBA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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