ENSG00000132603


Homo sapiens

Features
Gene ID: ENSG00000132603
  
Biological name :NIP7
  
Synonyms : NIP7 / NIP7, nucleolar pre-rRNA processing protein / Q9Y221
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: q22.1
Gene start: 69339430
Gene end: 69343111
  
Corresponding Affymetrix probe sets: 219031_s_at (Human Genome U133 Plus 2.0 Array)   223397_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000254940
Ensembl peptide - ENSP00000463739
Ensembl peptide - ENSP00000254941
Ensembl peptide - ENSP00000464159
Ensembl peptide - ENSP00000464348
NCBI entrez gene - 51388     See in Manteia.
RefSeq - NM_001199434
RefSeq - NM_016101
RefSeq Peptide - NP_001186363
RefSeq Peptide - NP_057185
swissprot - Q9Y221
swissprot - J3QLW7
swissprot - J3QRD6
swissprot - J3QRR4
Ensembl - ENSG00000132603
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nip7ENSDARG00000059075Danio rerio
 NIP7ENSGALG00000000650Gallus gallus
 Nip7ENSMUSG00000031917Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002478  PUA domain
 IPR005155  Ribosome biogenesis factor NIP7-like
 IPR015947  PUA-like superfamily
 IPR016686  Ribosome biogenesis factor, NIP7
 IPR036974  PUA domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0042255 ribosome assembly IEA
 biological_processGO:0042273 ribosomal large subunit biogenesis IBA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0030687 preribosome, large subunit precursor IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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