ENSDARG00000059455


Danio rerio

Features
Gene ID: ENSDARG00000059455
  
Biological name :dqx1
  
Synonyms : DEAQ box RNA-dependent ATPase 1 / dqx1
  
Possible biological names infered from orthology : ATP-dependent RNA helicase DQX1 / Q8TE96 / Q924H9
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 72066835
Gene end: 72075456
  
Corresponding Affymetrix probe sets: Dr.10422.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000077086
swissprot - E7F4G5
ZFIN ID - ZDB-GENE-150224-1
Ensembl - ENSDARG00000059455
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DQX1ENSG00000144045Homo sapiens
 Dqx1ENSMUSG00000009145Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dhx32b / DEAH (Asp-Glu-Ala-His) box polypeptide 32b / DHX32* / Q7L7V1* / Q8BZS9* / DEAH-box helicase 32 (putative)* / Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 *ENSDARG0000007902940
dhx32a / DEAH (Asp-Glu-Ala-His) box polypeptide 32a / DHX32* / Q7L7V1* / DEAH-box helicase 32 (putative)*ENSDARG0000007746139


Protein motifs (from Interpro)
Interpro ID Name
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 cellular_componentGO:0005681 spliceosomal complex IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr