ENSDARG00000077461


Danio rerio

Features
Gene ID: ENSDARG00000077461
  
Biological name :dhx32a
  
Synonyms : DEAH (Asp-Glu-Ala-His) box polypeptide 32a / dhx32a
  
Possible biological names infered from orthology : DEAH-box helicase 32 (putative) / DHX32 / Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 / Q7L7V1 / Q8BZS9
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 45150709
Gene end: 45189108
  
Corresponding Affymetrix probe sets: Dr.13700.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000103200
NCBI entrez gene - 100006246     See in Manteia.
RefSeq - NM_001202472
RefSeq Peptide - NP_001189401
swissprot - E7F9S1
ZFIN ID - ZDB-GENE-130613-6
Ensembl - ENSDARG00000077461
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DHX32ENSGALG00000038480Gallus gallus
 DHX32ENSG00000089876Homo sapiens
 Dhx32ENSMUSG00000030986Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dhx32b / DEAH (Asp-Glu-Ala-His) box polypeptide 32b / DHX32* / Q7L7V1* / Q8BZS9* / DEAH-box helicase 32 (putative)* / Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 *ENSDARG0000007902962
dqx1 / DEAQ box RNA-dependent ATPase 1 / Q8TE96*ENSDARG0000005945529


Protein motifs (from Interpro)
Interpro ID Name
 IPR007502  Helicase-associated domain
 IPR011709  Domain of unknown function DUF1605
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 cellular_componentGO:0005681 spliceosomal complex IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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