ENSDARG00000059811


Danio rerio

Features
Gene ID: ENSDARG00000059811
  
Biological name :smpd5
  
Synonyms : F1QG30 / smpd5 / sphingomyelin phosphodiesterase 5
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 53519048
Gene end: 53542242
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000077993
Ensembl peptide - ENSDARP00000104571
NCBI entrez gene - 567592     See in Manteia.
RefSeq - NM_001077615
RefSeq - XM_005158452
RefSeq - XM_005158453
RefSeq Peptide - NP_001071083
swissprot - F1QG30
ZFIN ID - ZDB-GENE-061110-22
Ensembl - ENSDARG00000059811
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
smpd3 / sphingomyelin phosphodiesterase 3, neutral / Q9JJY3* / Q9NY59* / sphingomyelin phosphodiesterase 3*ENSDARG0000009822643


Protein motifs (from Interpro)
Interpro ID Name
 IPR005135  Endonuclease/exonuclease/phosphatase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006665 sphingolipid metabolic process IEA
 biological_processGO:0006687 glycosphingolipid metabolic process IDA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane IEA
 cellular_componentGO:0005758 mitochondrial intermembrane space IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004767 sphingomyelin phosphodiesterase activity IDA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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