ENSDARG00000060176


Danio rerio

Features
Gene ID: ENSDARG00000060176
  
Biological name :trmt10b
  
Synonyms : trmt10b / tRNA methyltransferase 10B
  
Possible biological names infered from orthology : Q6PF06 / Q9D075 / tRNA methyltransferase 10 homolog B
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 7783113
Gene end: 7797684
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000154123
Ensembl peptide - ENSDARP00000078938
Ensembl peptide - ENSDARP00000142268
NCBI entrez gene - 768135     See in Manteia.
RefSeq - XM_017356915
RefSeq - NM_001077281
RefSeq Peptide - NP_001070749
swissprot - F1REK3
ZFIN ID - ZDB-GENE-061013-313
Ensembl - ENSDARG00000060176
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRMT10BENSGALG00000029118Gallus gallus
 Q6PF06ENSG00000165275Homo sapiens
 Q9D075ENSMUSG00000035601Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trmt10a / tRNA methyltransferase 10A / Q8TBZ6*ENSDARG0000003667826
trmt10c / tRNA methyltransferase 10C, mitochondrial RNase P subunit / Q3UFY8* / Q7L0Y3* / tRNA methyltransferase 10 homolog C *ENSDARG0000004157523


Protein motifs (from Interpro)
Interpro ID Name
 IPR007356  tRNA (guanine-N1-)-methyltransferase, eukaryotic
 IPR016009  tRNA methyltransferase TRMD/TRM10-type domain
 IPR028564  tRNA methyltransferase TRM10-type domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr