ENSDARG00000036678


Danio rerio

Features
Gene ID: ENSDARG00000036678
  
Biological name :trmt10a
  
Synonyms : trmt10a / tRNA methyltransferase 10A
  
Possible biological names infered from orthology : Q8TBZ6
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 18702534
Gene end: 18712554
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000109893
Ensembl peptide - ENSDARP00000143482
Ensembl peptide - ENSDARP00000142989
Ensembl peptide - ENSDARP00000142879
NCBI entrez gene - 560222     See in Manteia.
RefSeq - XM_017356998
swissprot - E7FBE2
swissprot - A0A286Y8I8
swissprot - A0A1D5NT17
swissprot - A0A1D5NSR2
ZFIN ID - ZDB-GENE-130530-594
Ensembl - ENSDARG00000036678
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRMT10AENSGALG00000012264Gallus gallus
 Q8TBZ6ENSG00000145331Homo sapiens
 Trmt10aENSMUSG00000004127Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trmt10b / tRNA methyltransferase 10B / Q6PF06* / Q9D075* / tRNA methyltransferase 10 homolog B *ENSDARG0000006017624
trmt10c / tRNA methyltransferase 10C, mitochondrial RNase P subunit / Q3UFY8* / Q7L0Y3* / tRNA methyltransferase 10 homolog C *ENSDARG0000004157517


Protein motifs (from Interpro)
Interpro ID Name
 IPR007356  tRNA (guanine-N1-)-methyltransferase, eukaryotic
 IPR011989  Armadillo-like helical
 IPR016009  tRNA methyltransferase TRMD/TRM10-type domain
 IPR016653  tRNA (guanine(9)-N(1))-methyltransferase TRM10/TRM10A
 IPR028564  tRNA methyltransferase TRM10-type domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0032259 methylation IEA
 molecular_functionGO:0008168 methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr