ENSGALG00000012264


Gallus gallus

Features
Gene ID: ENSGALG00000012264
  
Biological name :TRMT10A
  
Synonyms : TRMT10A / tRNA methyltransferase 10A
  
Possible biological names infered from orthology : Q8TBZ6
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 60403325
Gene end: 60412273
  
Corresponding Affymetrix probe sets: Gga.11920.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020005
NCBI entrez gene - 422708     See in Manteia.
RefSeq - XM_015285633
RefSeq - XM_015285634
RefSeq - XM_015285635
RefSeq - XM_015285636
RefSeq - XM_015285632
swissprot - F1N8S8
Ensembl - ENSGALG00000012264
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trmt10aENSDARG00000036678Danio rerio
 Q8TBZ6ENSG00000145331Homo sapiens
 Trmt10aENSMUSG00000004127Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRMT10C / tRNA methyltransferase 10C, mitochondrial RNase P subunit / Q3UFY8* / Q7L0Y3* / tRNA methyltransferase 10 homolog C *ENSGALG0000001532820
TRMT10B / tRNA methyltransferase 10B / Q6PF06* / Q9D075* / tRNA methyltransferase 10 homolog B *ENSGALG0000002911815


Protein motifs (from Interpro)
Interpro ID Name
 IPR007356  tRNA (guanine-N1-)-methyltransferase, eukaryotic
 IPR016009  tRNA methyltransferase TRMD/TRM10-type domain
 IPR016653  tRNA (guanine(9)-N(1))-methyltransferase TRM10/TRM10A
 IPR028564  tRNA methyltransferase TRM10-type domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030488 tRNA methylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0015629 actin cytoskeleton IEA
 molecular_functionGO:0000049 tRNA binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0009019 tRNA (guanine-N1-)-methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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