ENSDARG00000060177


Danio rerio

Features
Gene ID: ENSDARG00000060177
  
Biological name :vcpip1
  
Synonyms : valosin containing protein (p97)/p47 complex interacting protein 1 / vcpip1
  
Possible biological names infered from orthology : Q96JH7 / valosin containing protein interacting protein 1
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 42072231
Gene end: 42083513
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000078952
Ensembl peptide - ENSDARP00000120275
NCBI entrez gene - 570582     See in Manteia.
RefSeq - XM_694079
swissprot - F1QCM0
swissprot - F1REJ4
ZFIN ID - ZDB-GENE-070912-613
Ensembl - ENSDARG00000060177
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VCPIP1ENSGALG00000042883Gallus gallus
 Q96JH7ENSG00000175073Homo sapiens
 Vcpip1ENSMUSG00000045210Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003323  OTU domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:1904888 cranial skeletal system development IMP


Pathways (from Reactome)
Pathway description
Ovarian tumor domain proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000135 notochord notochord immature , abnormal
Show

 ZFA:0000155 somite somite malformed , abnormal
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 ZFA:0001094 whole organism whole organism decreased size , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

 ZFA:0001115 trunk trunk immature , abnormal
trunk decreased thickness , abnormal
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 ZFA:0001117 post-vent region post-vent region curled , abnormal
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 ZFA:0001227 mandibular arch skeleton mandibular arch skeleton decreased size , abnormal
Show

 ZFA:0001405 ethmoid cartilage ethmoid cartilage absent , abnormal
Show

 ZFA:0001460 pharyngeal arch cartilage pharyngeal arch cartilage malformed , abnormal
Show

 ZFA:0001604 caudal fin upper lobe caudal fin upper lobe fused with caudal fin lower lobe , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000087554 cdk1 / cyclin-dependent kinase 1 / P06493* / P11440*  / reaction






 

1 s.

 
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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr