ENSDARG00000060312


Danio rerio

Features
Gene ID: ENSDARG00000060312
  
Biological name :wdr62
  
Synonyms : wdr62 / WD repeat domain 62
  
Possible biological names infered from orthology : O43379
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 5565641
Gene end: 5624456
  
Corresponding Affymetrix probe sets: Dr.16585.1.S1_at (Zebrafish Array)   Dr.365.1.A1_at (Zebrafish Array)   XM_694487_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000144578
Ensembl peptide - ENSDARP00000098255
Ensembl peptide - ENSDARP00000116243
NCBI entrez gene - 570949     See in Manteia.
RefSeq - NM_001312680
RefSeq - XM_005169696
RefSeq - XM_694487
RefSeq Peptide - NP_001299609
swissprot - Q1L932
swissprot - F6NPK9
swissprot - A0A286YBK5
ZFIN ID - ZDB-GENE-060503-291
Ensembl - ENSDARG00000060312
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WDR62ENSG00000075702Homo sapiens
 Wdr62ENSMUSG00000037020Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mapkbp1 / mitogen-activated protein kinase binding protein 1 / O60336* / Mus musculus mitogen-activated protein kinase binding protein 1 (Mapkbp1), transcript variant 1, mRNA.*ENSDARG0000010374637


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR011047  Quinoprotein alcohol dehydrogenase-like superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000152 retina retina decreased size , abnormal
retina has fewer parts of type retina cell, abnormal
retina mitotic cell cycle increased occurrence , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr