ENSDARG00000060368


Danio rerio

Features
Gene ID: ENSDARG00000060368
  
Biological name :syn1
  
Synonyms : syn1 / synapsin I
  
Possible biological names infered from orthology : O88935 / P17600 / Synapsin-1
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 31119548
Gene end: 31148319
  
Corresponding Affymetrix probe sets: Dr.15258.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000115298
NCBI entrez gene - 570672     See in Manteia.
RefSeq - NM_001126437
RefSeq Peptide - NP_001119909
swissprot - B0UXI4
ZFIN ID - ZDB-GENE-081105-93
Ensembl - ENSDARG00000060368
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYN1ENSG00000008056Homo sapiens
 Syn1ENSMUSG00000037217Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
syn2b / synapsin IIb / SYN2* / Q64332* / Synapsin-2 * / synapsin II*ENSDARG0000010105450
syn2a / synapsin IIa / SYN2* / Q64332* / Synapsin-2 * / synapsin II*ENSDARG0000004594538


Protein motifs (from Interpro)
Interpro ID Name
 IPR001359  Synapsin
 IPR013815  ATP-grasp fold, subdomain 1
 IPR016185  Pre-ATP-grasp domain superfamily
 IPR019735  Synapsin, conserved site
 IPR019736  Synapsin, phosphorylation site
 IPR020897  Synapsin, pre-ATP-grasp domain
 IPR020898  Synapsin, ATP-binding domain
 IPR028713  Synapsin-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007269 neurotransmitter secretion IEA
 cellular_componentGO:0008021 synaptic vesicle IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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