ENSDARG00000060578


Danio rerio

Features
Gene ID: ENSDARG00000060578
  
Biological name :si:dkey-226m8.10
  
Synonyms : si:dkey-226m8.10
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 33199998
Gene end: 33215389
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000122085
Ensembl peptide - ENSDARP00000088708
NCBI entrez gene - 100001344     See in Manteia.
RefSeq - NM_001110226
RefSeq Peptide - NP_001103696
swissprot - F6P0Z6
swissprot - F1QVI1
ZFIN ID - ZDB-GENE-060526-258
Ensembl - ENSDARG00000060578
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
smarca2 / SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 / P51531*ENSDARG0000000890447
smarca4a / SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a / P51532* / Q3TKT4* / SMARCA4* / SWI/SNF related, matrix associated, actin depe...ENSDARG0000007722643
SMARCA4 / SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 / P51532*ENSDARG0000010433939


Protein motifs (from Interpro)
Interpro ID Name
 IPR001487  Bromodomain
 IPR018359  Bromodomain, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006338 chromatin remodeling IEA
 cellular_componentGO:0016514 SWI/SNF complex IEA
 molecular_functionGO:0016887 ATPase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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