ENSDARG00000060682


Danio rerio

Features
Gene ID: ENSDARG00000060682
  
Biological name :agr1
  
Synonyms : agr1 / anterior gradient 1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 45591239
Gene end: 45603009
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119506
Ensembl peptide - ENSDARP00000155834
Ensembl peptide - ENSDARP00000080198
NCBI entrez gene - 335309     See in Manteia.
RefSeq - NM_001099232
RefSeq Peptide - NP_001092702
swissprot - E9QEK9
swissprot - F1Q8B0
ZFIN ID - ZDB-GENE-030131-7249
Ensembl - ENSDARG00000060682
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
agr2 / Q5RZ65 / anterior gradient 2 / O88312* / O95994* / Anterior gradient * / anterior gradient 2, protein disulphide isomerase family member*ENSDARG0000007048052
txndc12 / thioredoxin domain containing 12 (endoplasmic reticulum) / O95881* / Q9CQU0* / thioredoxin domain containing 12*ENSDARG0000003898033


Protein motifs (from Interpro)
Interpro ID Name
 IPR012336  Thioredoxin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0031101 fin regeneration IMP
 biological_processGO:0060548 negative regulation of cell death IBA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 molecular_functionGO:0002162 dystroglycan binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr