ENSDARG00000060835


Danio rerio

Features
Gene ID: ENSDARG00000060835
  
Biological name :tecpr2
  
Synonyms : tecpr2 / tectonin beta-propeller repeat containing 2
  
Possible biological names infered from orthology : O15040 / tectonin beta-propeller repeat-containing protein 2 isoform 2
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 29282863
Gene end: 29312506
  
Corresponding Affymetrix probe sets: Dr.25330.1.A1_at (Zebrafish Array)   NM_001045179_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000121461
Ensembl peptide - ENSDARP00000094999
NCBI entrez gene - 569212     See in Manteia.
RefSeq - NM_001045179
RefSeq Peptide - NP_001038644
swissprot - F6P3V2
swissprot - F1QYC9
ZFIN ID - ZDB-GENE-060503-358
Ensembl - ENSDARG00000060835
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TECPR2ENSGALG00000011373Gallus gallus
 O15040ENSG00000196663Homo sapiens
 Tecpr2ENSMUSG00000021275Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hps5 / Hermansky-Pudlak syndrome 5 / P59438* / Q9UPZ3* / Hermansky-Pudlak syndrome 5 protein homolog * / HPS5, biogenesis of lysosomal organelles complex 2 subunit 2*ENSDARG0000007106214


Protein motifs (from Interpro)
Interpro ID Name
 IPR006624  Beta-propeller repeat TECPR
 IPR009091  Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR029772  Tectonin beta-propeller repeat-containing protein 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr