ENSDARG00000061413


Danio rerio

Features
Gene ID: ENSDARG00000061413
  
Biological name :sec23ip
  
Synonyms : SEC23 interacting protein / sec23ip
  
Possible biological names infered from orthology : Q9Y6Y8
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 25549425
Gene end: 25566308
  
Corresponding Affymetrix probe sets: Dr.1326.1.A1_at (Zebrafish Array)   NM_001077379_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000081987
Ensembl peptide - ENSDARP00000133521
NCBI entrez gene - 560750     See in Manteia.
RefSeq - NM_001077379
RefSeq Peptide - NP_001070847
swissprot - A8E7C9
swissprot - A0A0R4IDW9
ZFIN ID - ZDB-GENE-030131-5259
Ensembl - ENSDARG00000061413
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SEC23IPENSGALG00000009466Gallus gallus
 Q9Y6Y8ENSG00000107651Homo sapiens
 Sec23ipENSMUSG00000055319Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ddhd2 / DDHD domain containing 2 / O94830* / Q80Y98* / Phospholipase DDHD2 *ENSDARG0000007676534
ddhd1a / DDHD domain containing 1a / DDHD1* / Q8NEL9* / DDHD domain containing 1* / phospholipase DDHD1 isoform 4 *ENSDARG0000008680817
ddhd1b / DDHD domain containing 1b / DDHD1* / Q8NEL9* / DDHD domain containing 1* / phospholipase DDHD1 isoform 4 *ENSDARG0000003704217


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR004177  DDHD domain
 IPR013761  Sterile alpha motif/pointed domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IBA
 biological_processGO:0007030 Golgi organization IBA
 cellular_componentGO:0030134 COPII-coated ER to Golgi transport vesicle IBA
 molecular_functionGO:0004620 phospholipase activity IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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