ENSG00000107651


Homo sapiens

Features
Gene ID: ENSG00000107651
  
Biological name :SEC23IP
  
Synonyms : Q9Y6Y8 / SEC23 interacting protein / SEC23IP
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: 1
Band: q26.11
Gene start: 119892711
Gene end: 119944658
  
Corresponding Affymetrix probe sets: 1558919_a_at (Human Genome U133 Plus 2.0 Array)   209175_at (Human Genome U133 Plus 2.0 Array)   209176_at (Human Genome U133 Plus 2.0 Array)   216392_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000438773
Ensembl peptide - ENSP00000358071
Ensembl peptide - ENSP00000396906
Ensembl peptide - ENSP00000416723
NCBI entrez gene - 11196     See in Manteia.
OMIM - 617852
RefSeq - XM_017015610
RefSeq - NM_007190
RefSeq - XM_005269469
RefSeq - XM_005269470
RefSeq Peptide - NP_009121
swissprot - Q9Y6Y8
swissprot - H7C0V8
swissprot - H7C4C4
swissprot - A0A0C4DH82
Ensembl - ENSG00000107651
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sec23ipENSDARG00000061413Danio rerio
 SEC23IPENSGALG00000009466Gallus gallus
 Sec23ipENSMUSG00000055319Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DDHD2 / O94830 / DDHD domain containing 2ENSG0000008578838
DDHD1 / Q8NEL9 / DDHD domain containing 1ENSG0000010052319


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR004170  WWE domain
 IPR004177  DDHD domain
 IPR013761  Sterile alpha motif/pointed domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport TAS
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IBA
 biological_processGO:0007030 Golgi organization TAS
 biological_processGO:0048208 COPII vesicle coating TAS
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005737 cytoplasm TAS
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005793 endoplasmic reticulum-Golgi intermediate compartment TAS
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0012507 ER to Golgi transport vesicle membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030134 COPII-coated ER to Golgi transport vesicle TAS
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0004620 phospholipase activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000138674 O94979 / SEC31A / SEC31 homolog A, COPII coat complex component  / complex
 ENSG00000138768 USO1 / O60763 / USO1 vesicle transport factor  / reaction / complex
 ENSG00000141551 CSNK1D / P48730 / casein kinase 1 delta  / reaction
 ENSG00000157020 SEC13 / P55735 / SEC13 homolog, nuclear pore and COPII coat complex component  / complex
 ENSG00000138802 O95487 / SEC24B / SEC24 homolog B, COPII coat complex component  / reaction / complex
 ENSG00000114354 TFG / Q92734 / TRK-fused gene  / complex / reaction
 ENSG00000113615 O95486 / SEC24A / SEC24 homolog A, COPII coat complex component  / reaction / complex
 ENSG00000138069 RAB1A / P62820 / RAB1A, member RAS oncogene family  / complex / reaction
 ENSG00000148396 O15027 / SEC16A / SEC16 homolog A, endoplasmic reticulum export factor  / reaction / complex
 ENSG00000150961 O94855 / SEC24D / SEC24 homolog D, COPII coat complex component  / reaction / complex
 ENSG00000152700 SAR1B / Q9Y6B6 / secretion associated Ras related GTPase 1B  / reaction / complex
 ENSG00000100934 Q15436 / SEC23A / Sec23 homolog A, coat complex II component  / complex / reaction
 ENSG00000120341 Q96JE7 / SEC16B / SEC16 homolog B, endoplasmic reticulum export factor  / reaction / complex
 ENSG00000265808 O75396 / SEC22B / SEC22 homolog B, vesicle trafficking protein (gene/pseudogene)  / reaction / complex
 ENSG00000176986 P53992 / SEC24C / SEC24 homolog C, COPII coat complex component  / reaction / complex
 ENSG00000167110 GOLGA2 / Q08379 / golgin A2  / reaction / complex
 ENSG00000114745 Q9BQQ3 / GORASP1 / golgi reassembly stacking protein 1  / reaction / complex






 

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