ENSG00000114354


Homo sapiens

Features
Gene ID: ENSG00000114354
  
Biological name :TFG
  
Synonyms : Q92734 / TFG / TRK-fused gene
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: q12.2
Gene start: 100709331
Gene end: 100748966
  
Corresponding Affymetrix probe sets: 217839_at (Human Genome U133 Plus 2.0 Array)   221871_s_at (Human Genome U133 Plus 2.0 Array)   239385_at (Human Genome U133 Plus 2.0 Array)   244614_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000419960
Ensembl peptide - ENSP00000419559
Ensembl peptide - ENSP00000420797
Ensembl peptide - ENSP00000479981
Ensembl peptide - ENSP00000479269
Ensembl peptide - ENSP00000240851
Ensembl peptide - ENSP00000397182
Ensembl peptide - ENSP00000417952
Ensembl peptide - ENSP00000419504
NCBI entrez gene - 10342     See in Manteia.
OMIM - 602498
RefSeq - XM_017005530
RefSeq - NM_006070
RefSeq - XM_005247066
RefSeq - XM_006713472
RefSeq - XM_006713473
RefSeq - XM_011512334
RefSeq - XM_017005527
RefSeq - XM_017005528
RefSeq - XM_017005529
RefSeq - NM_001007565
RefSeq - NM_001195478
RefSeq - NM_001195479
RefSeq Peptide - NP_001182408
RefSeq Peptide - NP_006061
RefSeq Peptide - NP_001007566
RefSeq Peptide - NP_001182407
swissprot - Q92734
swissprot - C9JTY3
swissprot - C9JUE0
swissprot - C9JJP5
Ensembl - ENSG00000114354
  
Related genetic diseases (OMIM): 604484 - Hereditary motor and sensory neuropathy, Okinawa type, 604484
  615658 - ?Spastic paraplegia 57, autosomal recessive, 615658
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tfgENSDARG00000003641Danio rerio
 TFGENSGALG00000015299Gallus gallus
 TfgENSMUSG00000022757Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000270  PB1 domain
 IPR033512  Protein TFG
 IPR034857  TFG, PB1 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IMP
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling HMP
 biological_processGO:0048208 COPII vesicle coating TAS
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005737 cytoplasm NAS
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0070971 endoplasmic reticulum exit site IDA
 molecular_functionGO:0004871 obsolete signal transducer activity HMP
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042802 identical protein binding IPI


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000572 Visual loss 
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 HP:0000648 Optic atrophy 
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 HP:0000763 Sensory neuropathy "Peripheral neuropathy affecting primarily the sensory nerves." [HPO:curators]
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 HP:0001258 Spastic paraplegia 
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0002171 Gliosis 
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 HP:0002378 Hand tremor 
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 HP:0002380 Fasciculations "Fasciculations are observed as small, local, involuntary muscle contractions (twitching) visible under the skin. Fasciculations result from increased irritability of an axon (which in turn is often a manifestation of disease of a motor neuron). This leads to sporadic discharges of all the muscle fibers controlled by the axon in isolation from other motor units." [HPO:curators]
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 HP:0002398 Degeneration of anterior horn cells 
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 HP:0002445 Tetraplegia 
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 HP:0002540 Inability to walk 
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 HP:0002936 Distal sensory impairment 
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 HP:0003077 Hyperlipidemia 
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 HP:0003134 Abnormal motor and sensory nerve conduction 
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 HP:0003380 Decreased number of myelinated fibers "A loss of myelinated nerve fibers (in general, this finding can be observed on nerve biopsy)." [HPO:curators]
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003551 Difficulty climbing stairs 
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 HP:0003581 Onset in adulthood 
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 HP:0003677 Slow progression 
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 HP:0003698 Difficulty standing 
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 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
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 HP:0005109 Abnormality of the Achilles tendon 
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 HP:0007126 Proximal amyotrophy "Amyotrophy (muscular atrophy) affecting the proximal musculature." [HPO:curators]
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 HP:0007141 Sensorimotor neuropathy 
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 HP:0007178 Motor polyneuropathy 
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 HP:0008180 Mildly elevated creatine phosphokinase 
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 HP:0008944 Distal lower limb muscle weakness and atrophy "Amyotrophy of distal lower leg muscles with resultant weakness." [HPO:curators]
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 HP:0009830 Peripheral neuropathy "Peripheral neuropathy is a general term for any disorder of the peripheral nervous system. The main clinical features used to classify peripheral neuropathy are distribution, type (mainly demyelinating versus mainly axonal), duration, and course." [HPO:curators]
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 HP:0012447 Abnormal myelination "Any anomaly in the process by which myelin sheaths are formed and maintained around neurons." [HPO:probinson, MP:0000920]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000100934 Q15436 / SEC23A / Sec23 homolog A, coat complex II component  / complex / reaction
 ENSG00000120341 Q96JE7 / SEC16B / SEC16 homolog B, endoplasmic reticulum export factor  / complex / reaction
 ENSG00000152700 SAR1B / Q9Y6B6 / secretion associated Ras related GTPase 1B  / complex / reaction
 ENSG00000176986 P53992 / SEC24C / SEC24 homolog C, COPII coat complex component  / complex / reaction
 ENSG00000138802 O95487 / SEC24B / SEC24 homolog B, COPII coat complex component  / complex / reaction
 ENSG00000148396 O15027 / SEC16A / SEC16 homolog A, endoplasmic reticulum export factor  / reaction / complex
 ENSG00000113615 O95486 / SEC24A / SEC24 homolog A, COPII coat complex component  / complex / reaction
 ENSG00000150961 O94855 / SEC24D / SEC24 homolog D, COPII coat complex component  / complex / reaction
 ENSG00000114354 TFG / Q92734 / TRK-fused gene  / complex
 ENSG00000138674 O94979 / SEC31A / SEC31 homolog A, COPII coat complex component  / complex / reaction
 ENSG00000157020 SEC13 / P55735 / SEC13 homolog, nuclear pore and COPII coat complex component  / reaction / complex
 ENSG00000107651 Q9Y6Y8 / SEC23IP / SEC23 interacting protein  / complex / reaction
 ENSG00000265808 O75396 / SEC22B / SEC22 homolog B, vesicle trafficking protein (gene/pseudogene)  / reaction / complex






 

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