ENSDARG00000061479


Danio rerio

Features
Gene ID: ENSDARG00000061479
  
Biological name :thsd7aa
  
Synonyms : thrombospondin, type I, domain containing 7Aa / thsd7aa
  
Possible biological names infered from orthology : Q9UPZ6 / thrombospondin type 1 domain containing 7A / THSD7A
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 37620342
Gene end: 37842003
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000082128
Ensembl peptide - ENSDARP00000138800
NCBI entrez gene - 557991     See in Manteia.
RefSeq - XM_009294351
RefSeq - NM_001122760
RefSeq Peptide - NP_001116232
swissprot - F1QPE6
swissprot - A0A0R4IT78
ZFIN ID - ZDB-GENE-060503-709
Ensembl - ENSDARG00000061479
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 THSD7AENSGALG00000010718Gallus gallus
 Q9UPZ6ENSG00000005108Homo sapiens
 Thsd7aENSMUSG00000032625Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
thsd7ab / thrombospondin, type I, domain containing 7Ab / Q9UPZ6* / THSD7A* / thrombospondin type 1 domain containing 7A*ENSDARG0000009049665
thsd7ba / thrombospondin, type I, domain containing 7Ba / Q9C0I4* / THSD7B* / Q6P4U0* / thrombospondin type 1 domain containing 7B* / thrombospondin, type I, domain containing 7B*ENSDARG0000009502243
thsd7bb / thrombospondin, type I, domain containing 7Bb / Q9C0I4* / THSD7B* / Q6P4U0* / thrombospondin type 1 domain containing 7B* / thrombospondin, type I, domain containing 7B*ENSDARG0000006149740


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IMP
 biological_processGO:0002040 sprouting angiogenesis IMP
 biological_processGO:0008593 regulation of Notch signaling pathway IMP
 biological_processGO:0043534 blood vessel endothelial cell migration IMP
 biological_processGO:0048675 axon extension IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
O-glycosylation of TSR domain-containing proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000029 hindbrain hindbrain spatial pattern , abnormal
Show

 ZFA:0000037 anatomical structure anatomical structure decreased amount , abnormal
Show

 ZFA:0000075 spinal cord spinal cord decreased amount , abnormal
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 ZFA:0000114 heart heart mislocalised , abnormal
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 ZFA:0000671 horizontal myoseptum horizontal myoseptum lacks parts or has fewer parts of type RoP motor neuron axon, abnormal
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 ZFA:0001285 intersegmental vessel intersegmental vessel spatial pattern , abnormal
intersegmental vessel increased branchiness , abnormal
Show

 ZFA:0005034 parachordal vessel parachordal vessel absent , abnormal
parachordal vessel aplastic , abnormal
parachordal vessel angiogenesis decreased occurrence , abnormal
Show

 ZFA:0005179 MiP motor neuron MiP motor neuron axon morphology , abnormal
MiP motor neuron axon decreased length , abnormal
MiP motor neuron axon development process quality , abnormal
Show

 ZFA:0005180 RoP motor neuron RoP motor neuron axon morphology , abnormal
RoP motor neuron axon absent , abnormal
RoP motor neuron axon development decreased occurrence , abnormal
Show

 ZFA:0009247 secondary motor neuron secondary motor neuron axon development process quality , abnormal
secondary motor neuron axon morphology , abnormal
Show

 ZFA:0009303 endothelial tip cell endothelial tip cell cell projection morphology , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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