ENSG00000005108


Homo sapiens

Features
Gene ID: ENSG00000005108
  
Biological name :THSD7A
  
Synonyms : Q9UPZ6 / thrombospondin type 1 domain containing 7A / THSD7A
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: p21.3
Gene start: 11370357
Gene end: 11832198
  
Corresponding Affymetrix probe sets: 213894_at (Human Genome U133 Plus 2.0 Array)   214920_at (Human Genome U133 Plus 2.0 Array)   229159_at (Human Genome U133 Plus 2.0 Array)   230008_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000481440
Ensembl peptide - ENSP00000406482
NCBI entrez gene - 221981     See in Manteia.
OMIM - 612249
RefSeq - XM_011515194
RefSeq - NM_015204
RefSeq - XM_006715660
RefSeq - XM_006715662
RefSeq - XM_011515193
RefSeq - XM_006715659
RefSeq Peptide - NP_056019
swissprot - Q9UPZ6
swissprot - A0A087WY08
Ensembl - ENSG00000005108
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thsd7aaENSDARG00000061479Danio rerio
 thsd7abENSDARG00000090496Danio rerio
 THSD7AENSGALG00000010718Gallus gallus
 Thsd7aENSMUSG00000032625Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9C0I4 / THSD7B / thrombospondin type 1 domain containing 7BENSG0000014422948


Protein motifs (from Interpro)
Interpro ID Name
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR036383  Thrombospondin type-1 (TSP1) repeat superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IEA
 biological_processGO:0030154 cell differentiation IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA


Pathways (from Reactome)
Pathway description
Defective B3GALTL causes Peters-plus syndrome (PpS)
O-glycosylation of TSR domain-containing proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr