ENSDARG00000061687


Danio rerio

Features
Gene ID: ENSDARG00000061687
  
Biological name :atxn1a
  
Synonyms : ataxin 1a / atxn1a
  
Possible biological names infered from orthology : ataxin 1 / ATXN1 / P54253 / P54254
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 32257472
Gene end: 32461596
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000153062
Ensembl peptide - ENSDARP00000082698
Ensembl peptide - ENSDARP00000134028
Ensembl peptide - ENSDARP00000144834
NCBI entrez gene - 557340     See in Manteia.
RefSeq - NM_001044826
RefSeq Peptide - NP_001038291
swissprot - Q1L966
ZFIN ID - ZDB-GENE-060503-759
Ensembl - ENSDARG00000061687
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATXN1ENSGALG00000012709Gallus gallus
 ATXN1ENSG00000124788Homo sapiens
 Atxn1ENSMUSG00000046876Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atxn1b / ataxin 1b / ATXN1* / P54253* / P54254* / ataxin 1*ENSDARG0000006086234
atxn1l / ataxin 1-like / P0C7T5*ENSDARG0000008697725


Protein motifs (from Interpro)
Interpro ID Name
 IPR003652  Ataxin, AXH domain
 IPR020997  Capicua transcriptional repressor modulator, Ataxin-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr