ENSGALG00000012709


Gallus gallus

Features
Gene ID: ENSGALG00000012709
  
Biological name :ATXN1
  
Synonyms : ataxin 1 / ATXN1
  
Possible biological names infered from orthology : P54253 / P54254
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 61772078
Gene end: 61780828
  
Corresponding Affymetrix probe sets: GgaAffx.8057.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020719
NCBI entrez gene - 420843     See in Manteia.
RefSeq - XM_015275961
RefSeq - XM_015275962
RefSeq - XM_015275963
RefSeq - XM_015275965
RefSeq - XM_015275966
RefSeq - XM_015275967
RefSeq - XM_003640755
swissprot - E1BZ23
Ensembl - ENSGALG00000012709
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atxn1aENSDARG00000061687Danio rerio
 atxn1bENSDARG00000060862Danio rerio
 ATXN1ENSG00000124788Homo sapiens
 Atxn1ENSMUSG00000046876Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ATXN1L / ataxin 1 like / P0C7T5* / P0C7T6*ENSGALG0000002825326


Protein motifs (from Interpro)
Interpro ID Name
 IPR003652  Ataxin, AXH domain
 IPR020997  Capicua transcriptional repressor modulator, Ataxin-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0051168 nuclear export IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016363 nuclear matrix IEA
 cellular_componentGO:0042272 nuclear RNA export factor complex IEA
 cellular_componentGO:0042405 nuclear inclusion body IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008022 protein C-terminus binding IEA
 molecular_functionGO:0008266 poly(U) RNA binding IEA
 molecular_functionGO:0034046 poly(G) binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0043621 protein self-association IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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