ENSDARG00000061762


Danio rerio

Features
Gene ID: ENSDARG00000061762
  
Biological name :trim108
  
Synonyms : trim108 / tripartite motif containing 108
  
Possible biological names infered from orthology : Q5EBN2 / TRIM61 / tripartite motif containing 61
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 21789703
Gene end: 21805974
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000082840
Ensembl peptide - ENSDARP00000127841
Ensembl peptide - ENSDARP00000129868
swissprot - F1QN09
swissprot - X1WC98
swissprot - X1WI03
ZFIN ID - ZDB-GENE-060503-670
Ensembl - ENSDARG00000061762
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5EBN2ENSG00000183439Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trim109 / tripartite motif containing 109 / Q5EBN2* / TRIM61* / tripartite motif containing 61*ENSDARG0000006242950
FP015862.4 / Q5EBN2* / TRIM61* / tripartite motif containing 61*ENSDARG0000011555022


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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