ENSDARG00000062429


Danio rerio

Features
Gene ID: ENSDARG00000062429
  
Biological name :trim109
  
Synonyms : trim109 / tripartite motif containing 109
  
Possible biological names infered from orthology : Q5EBN2 / TRIM61 / tripartite motif containing 61
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 14064397
Gene end: 14074594
  
Corresponding Affymetrix probe sets: Dr.1397.1.A1_at (Zebrafish Array)   NM_001045303_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000084667
NCBI entrez gene - 723998     See in Manteia.
RefSeq - NM_001045303
RefSeq Peptide - NP_001038768
swissprot - Q1ECU9
ZFIN ID - ZDB-GENE-060616-101
Ensembl - ENSDARG00000062429
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5EBN2ENSG00000183439Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trim108 / tripartite motif containing 108 / Q5EBN2* / TRIM61* / tripartite motif containing 61*ENSDARG0000006176250
FP015862.4 / Q5EBN2* / TRIM61* / tripartite motif containing 61*ENSDARG0000011555024


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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