ENSDARG00000061865


Danio rerio

Features
Gene ID: ENSDARG00000061865
  
Biological name :ddx10
  
Synonyms : ddx10 / DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
  
Possible biological names infered from orthology : DEAD-box helicase 10 / Probable ATP-dependent RNA helicase DDX10 / Q13206 / Q80Y44
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 25120546
Gene end: 25171784
  
Corresponding Affymetrix probe sets: Dr.13692.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000124412
NCBI entrez gene - 569118     See in Manteia.
RefSeq - XM_001922185
swissprot - F8W3D4
ZFIN ID - ZDB-GENE-071022-2
Ensembl - ENSDARG00000061865
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DDX10ENSGALG00000017156Gallus gallus
 DDX10ENSG00000178105Homo sapiens
 Ddx10ENSMUSG00000053289Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000629  ATP-dependent RNA helicase DEAD-box, conserved site
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR025313  Domain of unknown function DUF4217
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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