ENSDARG00000061976


Danio rerio

Features
Gene ID: ENSDARG00000061976
  
Biological name :sema6bb
  
Synonyms : sema6bb / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Bb
  
Possible biological names infered from orthology : O54951 / Q9H3T3 / SEMA6B / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B / semaphorin 6B
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 18936603
Gene end: 19051906
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000083457
swissprot - B8JHX0
ZFIN ID - ZDB-GENE-081105-129
Ensembl - ENSDARG00000061976
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SEMA6BENSGALG00000001171Gallus gallus
 Q9H3T3ENSG00000167680Homo sapiens
 O54951ENSMUSG00000001227Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sema6ba / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6Ba / Q9H3T3* / SEMA6B* / O54951* / semaphorin 6B* / sema domain, transmembrane domain (TM), and cytop...ENSDARG0000003662676
sema6dl / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like / SEMA6D* / Q76KF0* / Q8NFY4* / semaphorin 6D*ENSDARG0000001153348
sema6e / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E / Q9WTM3* / SEMA6C* / Q9H3T2* / semaphorin 6C* / sema domain, transmembrane domain (TM), and cytopla...ENSDARG0000000018945
sema6d / sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D / Q9WTM3* / SEMA6C* / Q9H3T2* / semaphorin 6C* / sema domain, transmembrane domain (TM), and cytopla...ENSDARG0000000274843
sema5ba / sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5Ba / SEMA5B* / Q60519* / Q9P283* / semaphorin 5B*ENSDARG0000006147132
sema5bb / sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5Bb / SEMA5B* / Q60519* / Q9P283* / semaphorin 5B*ENSDARG0000007564831
sema5a / sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A / Q13591* / semaphorin 5A*ENSDARG0000005882130
sema7a / semaphorin 7A / O75326* / Q9QUR8* / semaphorin 7A (John Milton Hagen blood group)*ENSDARG0000007870721
si:ch211-113g11.6ENSDARG0000007044215


Protein motifs (from Interpro)
Interpro ID Name
 IPR001627  Sema domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR027231  Semaphorin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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