ENSDARG00000062116


Danio rerio

Features
Gene ID: ENSDARG00000062116
  
Biological name :ctdsplb
  
Synonyms : CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like b / ctdsplb
  
Possible biological names infered from orthology : CTD small phosphatase like / CTD small phosphatase-like protein / CTDSPL / O15194 / P58465
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 21356242
Gene end: 21381406
  
Corresponding Affymetrix probe sets: Dr.11791.1.A1_at (Zebrafish Array)   NM_001076615_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000117659
Ensembl peptide - ENSDARP00000141942
Ensembl peptide - ENSDARP00000120623
NCBI entrez gene - 767676     See in Manteia.
RefSeq - NM_001076615
RefSeq Peptide - NP_001070083
swissprot - A0A0R4IYK3
swissprot - B8JL80
swissprot - F1Q7E3
swissprot - B8JL79
ZFIN ID - ZDB-GENE-060929-488
Ensembl - ENSDARG00000062116
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CTDSPLENSGALG00000005710Gallus gallus
 CTDSPLENSG00000144677Homo sapiens
 CtdsplENSMUSG00000047409Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ctdspla / CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a / CTDSPL* / O15194* / P58465* / CTD small phosphatase like* / CTD small phosphatase-like protein *ENSDARG0000007167385
ctdsp1 / CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 / P58466* / Q9GZU7* / CTD small phosphatase 1* / Carboxy-terminal domain RNA polymerase II polyp...ENSDARG0000004067468
ctdsp2 / CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 / O14595* / Q8BX07* / CTD small phosphatase 2* / Carboxy-terminal domain RNA polymerase II polyp...ENSDARG0000003610265
Q5U395 / ctdnep1a / CTD nuclear envelope phosphatase 1a / O95476* / Q3TP92* / CTDNEP1* / CTD nuclear envelope phosphatase 1*ENSDARG0000001651930
ctdnep1b / CTD nuclear envelope phosphatase 1b / O95476* / Q3TP92* / CTDNEP1* / CTD nuclear envelope phosphatase 1*ENSDARG0000003578130


Protein motifs (from Interpro)
Interpro ID Name
 IPR004274  FCP1 homology domain
 IPR011948  Dullard phosphatase domain, eukaryotic
 IPR023214  HAD superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0016311 dephosphorylation IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0004721 phosphoprotein phosphatase activity IBA
 molecular_functionGO:0016791 phosphatase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr