ENSDARG00000062152


Danio rerio

Features
Gene ID: ENSDARG00000062152
  
Biological name :chaf1a
  
Synonyms : A0JMK9 / chaf1a / chromatin assembly factor 1, subunit A (p150)
  
Possible biological names infered from orthology : chromatin assembly factor 1 subunit A / Q13111 / Q9QWF0
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 22276283
Gene end: 22301929
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000101598
Ensembl peptide - ENSDARP00000117499
NCBI entrez gene - 563212     See in Manteia.
swissprot - B2GSW9
swissprot - Z4YIN8
swissprot - A0JMK9
ZFIN ID - ZDB-GENE-030131-5366
Ensembl - ENSDARG00000062152
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHAF1AENSGALG00000001126Gallus gallus
 CHAF1AENSG00000167670Homo sapiens
 Chaf1aENSMUSG00000002835Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR022043  Chromatin assembly factor 1 subunit A
 IPR029091  Chromatin assembly factor 1 subunit A, N-terminal
 IPR029105  Chromatin assembly factor 1 subunit A, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006260 DNA replication IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006334 nucleosome assembly IBA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0031497 chromatin assembly ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0033186 CAF-1 complex IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr