ENSMUSG00000002835


Mus musculus

Features
Gene ID: ENSMUSG00000002835
  
Biological name :Chaf1a
  
Synonyms : Chaf1a / Chromatin assembly factor 1 subunit A / Q9QWF0
  
Possible biological names infered from orthology : Q13111
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: D
Gene start: 56040416
Gene end: 56068026
  
Corresponding Affymetrix probe sets: 10446027 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000002914
NCBI entrez gene - 27221     See in Manteia.
MGI - MGI:1351331
RefSeq - NM_013733
RefSeq Peptide - NP_038761
swissprot - Q9QWF0
Ensembl - ENSMUSG00000002835
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A0JMK9ENSDARG00000062152Danio rerio
 CHAF1AENSGALG00000001126Gallus gallus
 CHAF1AENSG00000167670Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR022043  Chromatin assembly factor 1 subunit A
 IPR029091  Chromatin assembly factor 1 subunit A, N-terminal
 IPR029105  Chromatin assembly factor 1 subunit A, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006260 DNA replication IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006334 nucleosome assembly IBA
 biological_processGO:0006335 DNA replication-dependent nucleosome assembly IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0031497 chromatin assembly IEA
 cellular_componentGO:0000790 nuclear chromatin IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0033186 CAF-1 complex IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0070087 chromo shadow domain binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001730 embryonic growth arrest "the cessation of development beyond a particular stage" [J:17509]
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Allelic Composition: Lattm1Les/Lattm1Les,Tg(CD2-LAT2)1Wz/0
Genetic Background: Not Specified

 MP:0003111 abnormal nucleus morphology "abnormalities in the nucleus and/or its surrounding membrane" [J:91473, smb:Susan M. Bello, Mouse Genome Informatics Curator]
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Allelic Composition: Lattm1Les/Lattm1Les,Tg(CD2-LAT2)1Wz/0
Genetic Background: Not Specified

 MP:0011104 partial embryonic lethality before implantation "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and implantation (Mus: E0 to less than E4.5)" [MGI:csmith]
Show

Allelic Composition: Lattm1Les/Lattm1Les,Tg(CD2-LAT2)1Wz/0
Genetic Background: Not Specified

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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