ENSDARG00000062465


Danio rerio

Features
Gene ID: ENSDARG00000062465
  
Biological name :pgap1
  
Synonyms : pgap1 / post-GPI attachment to proteins 1
  
Possible biological names infered from orthology : GPI inositol-deacylase / Q3UUQ7 / Q75T13
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 24125445
Gene end: 24145714
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000084779
Ensembl peptide - ENSDARP00000122983
NCBI entrez gene - 100147850     See in Manteia.
swissprot - E9QJ74
swissprot - F1R8J0
ZFIN ID - ZDB-GENE-090313-216
Ensembl - ENSDARG00000062465
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000030789Gallus gallus
 PGAP1ENSG00000197121Homo sapiens
 Pgap1ENSMUSG00000073678Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR012908  GPI inositol-deacylase PGAP1-like
 IPR029058  Alpha/Beta hydrolase fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016788 hydrolase activity, acting on ester bonds IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000107 eye eye decreased size , abnormal
eye fused with eye , abnormal
Show

 ZFA:0001205 Meckel s cartilage Meckels cartilage shape , abnormal
Show

 ZFA:0001273 ventral mandibular arch ventral mandibular arch protruding , abnormal
Show

 ZFA:0001400 ceratohyal cartilage ceratohyal cartilage orientation axis , abnormal
Show

 ZFA:0001460 pharyngeal arch cartilage pharyngeal arch cartilage disorganized , abnormal
Show

 ZFA:0001516 ceratobranchial cartilage ceratobranchial cartilage curved , abnormal
ceratobranchial cartilage shortened , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr