ENSDARG00000062959


Danio rerio

Features
Gene ID: ENSDARG00000062959
  
Biological name :zgc:158785
  
Synonyms : zgc:158785
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 12799576
Gene end: 12821277
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000086017
NCBI entrez gene - 791214     See in Manteia.
swissprot - F1QFG6
ZFIN ID - ZDB-GENE-070112-1712
Ensembl - ENSDARG00000062959
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
march2 / Q1LVZ2 / membrane-associated ring finger (C3HC4) 2 / Q9P0N8* / Q99M02* / E3 ubiquitin-protein ligase MARCH2 * / membrane associated ring-CH-type finger 2*ENSDARG0000006173843
march1 / membrane-associated ring finger (C3HC4) 1 / Q8TCQ1* / Q6NZQ8* / E3 ubiquitin-protein ligase MARCH1 * / membrane associated ring-CH-type finger 1*ENSDARG0000003748723
march8 / membrane-associated ring finger (C3HC4) 8 / Q9DBD2* / Q5T0T0* / E3 ubiquitin-protein ligase MARCH8 * / membrane associated ring-CH-type finger 8*ENSDARG0000006248920
march11 / membrane-associated ring finger (C3HC4) 11 / A6NNE9* / Q8CBH7* / E3 ubiquitin-protein ligase MARCH11 * / membrane associated ring-CH-type finger 11*ENSDARG0000007521220
zgc:153256 / MARCH4 (1 of many) / Q9P2E8* / MARCH4* / Q80TE3* / E3 ubiquitin-protein ligase MARCH4 * / membrane associated ring-CH-type finger 4*ENSDARG0000005583919
march9 / membrane-associated ring finger (C3HC4) 9 / Q86YJ5* / Q3TZ87* / E3 ubiquitin-protein ligase MARCH9 * / membrane associated ring-CH-type finger 9*ENSDARG0000005574018
march4 / membrane-associated ring finger (C3HC4) 4 / Q9P2E8* / membrane associated ring-CH-type finger 4*ENSDARG0000005643918
BX470214.1 / MARCH1* / Q8TCQ1* / membrane associated ring-CH-type finger 1*ENSDARG000001107248


Protein motifs (from Interpro)
Interpro ID Name
 IPR011016  Zinc finger, RING-CH-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR033275  E3 ubiquitin-protein ligase MARCH-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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