ENSDARG00000062489


Danio rerio

Features
Gene ID: ENSDARG00000062489
  
Biological name :march8
  
Synonyms : march8 / membrane-associated ring finger (C3HC4) 8
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase MARCH8 / membrane associated ring-CH-type finger 8 / Q5T0T0 / Q9DBD2
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 17751866
Gene end: 18011208
  
Corresponding Affymetrix probe sets: Dr.26316.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000054578
Ensembl peptide - ENSDARP00000144109
Ensembl peptide - ENSDARP00000116635
Ensembl peptide - ENSDARP00000115648
NCBI entrez gene - 567818     See in Manteia.
RefSeq - NM_001327919
RefSeq - XM_009307233
RefSeq - XM_009307237
RefSeq Peptide - NP_001314848
swissprot - B8A531
swissprot - B8A530
swissprot - A8KB30
swissprot - A0A286YAB5
ZFIN ID - ZDB-GENE-080204-8
Ensembl - ENSDARG00000062489
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MARCH8ENSGALG00000005867Gallus gallus
 MARCH8ENSG00000165406Homo sapiens
 March8ENSMUSG00000025702Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
march1 / membrane-associated ring finger (C3HC4) 1 / Q8TCQ1* / Q6NZQ8* / E3 ubiquitin-protein ligase MARCH1 * / membrane associated ring-CH-type finger 1*ENSDARG0000003748761
march2 / Q1LVZ2 / membrane-associated ring finger (C3HC4) 2 / Q9P0N8* / Q99M02* / E3 ubiquitin-protein ligase MARCH2 * / membrane associated ring-CH-type finger 2*ENSDARG0000006173822
march9 / membrane-associated ring finger (C3HC4) 9 / Q86YJ5* / Q3TZ87* / E3 ubiquitin-protein ligase MARCH9 * / membrane associated ring-CH-type finger 9*ENSDARG0000005574019
march4 / membrane-associated ring finger (C3HC4) 4 / Q9P2E8* / membrane associated ring-CH-type finger 4*ENSDARG0000005643919
zgc:153256 / MARCH4 (1 of many) / Q9P2E8* / MARCH4* / Q80TE3* / E3 ubiquitin-protein ligase MARCH4 * / membrane associated ring-CH-type finger 4*ENSDARG0000005583918
zgc:158785ENSDARG0000006295917
march11 / membrane-associated ring finger (C3HC4) 11 / A6NNE9* / Q8CBH7* / E3 ubiquitin-protein ligase MARCH11 * / membrane associated ring-CH-type finger 11*ENSDARG0000007521217
BX470214.1 / MARCH1* / Q8TCQ1* / membrane associated ring-CH-type finger 1*ENSDARG0000011072415


Protein motifs (from Interpro)
Interpro ID Name
 IPR011016  Zinc finger, RING-CH-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR033275  E3 ubiquitin-protein ligase MARCH-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001058 caudal fin caudal fin kinked , abnormal
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 ZFA:0001094 whole organism whole organism decreased length , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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