ENSDARG00000063311


Danio rerio

Features
Gene ID: ENSDARG00000063311
  
Biological name :soga3a
  
Synonyms : soga3a / SOGA family member 3a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 5184402
Gene end: 5199333
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129239
NCBI entrez gene - 100332515     See in Manteia.
swissprot - X1WHG9
ZFIN ID - ZDB-GENE-100921-84
Ensembl - ENSDARG00000063311
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
soga3a / SOGA family member 3aENSDARG00000097245100
soga3b / SOGA family member 3bENSDARG0000007545566
soga1 / suppressor of glucose, autophagy associated 1 / O94964*ENSDARG0000006307534
mtcl1 / microtubule crosslinking factor 1 / Q9Y4B5*ENSDARG0000009140825
si:ch211-197l9.2 / SOGA3* / Q5TF21* / Q6NZL0* / AL096711.2* / Protein SOGA3 * / SOGA family member 3*ENSDARG000000782445


Protein motifs (from Interpro)
Interpro ID Name
 IPR027881  Protein SOGA


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010506 regulation of autophagy IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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