ENSDARG00000078244


Danio rerio

Features
Gene ID: ENSDARG00000078244
  
Biological name :si:ch211-197l9.2
  
Synonyms : si:ch211-197l9.2
  
Possible biological names infered from orthology : AL096711.2 / Protein SOGA3 / Q5TF21 / Q6NZL0 / SOGA3 / SOGA family member 3
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 30967686
Gene end: 30996756
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000114294
Ensembl peptide - ENSDARP00000117889
swissprot - F1QF17
swissprot - F1QN41
ZFIN ID - ZDB-GENE-091204-369
Ensembl - ENSDARG00000078244
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000031564Gallus gallus
 Q5TF21ENSG00000255330Homo sapiens
 SOGA3ENSG00000214338Homo sapiens
 Soga3ENSMUSG00000038916Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
soga1 / suppressor of glucose, autophagy associated 1 / O94964*ENSDARG0000006307532
soga3a / SOGA family member 3aENSDARG000000972457
soga3b / SOGA family member 3bENSDARG000000754557
soga3a / SOGA family member 3aENSDARG000000633117
mtcl1 / microtubule crosslinking factor 1 / Q9Y4B5*ENSDARG000000914083


Protein motifs (from Interpro)
Interpro ID Name
 IPR027881  Protein SOGA


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010506 regulation of autophagy IEA
 cellular_componentGO:0005615 extracellular space IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
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