ENSMUSG00000038916


Mus musculus

Features
Gene ID: ENSMUSG00000038916
  
Biological name :Soga3
  
Synonyms : Protein SOGA3 / Q6NZL0 / Soga3
  
Possible biological names infered from orthology : AL096711.2 / Q5TF21 / SOGA family member 3
  
Species: Mus musculus
  
Chr. number: 10
Strand: 1
Band: A4
Gene start: 29143839
Gene end: 29199630
  
Corresponding Affymetrix probe sets: 10362363 (MoGene1.0st)   1429628_at (Mouse Genome 430 2.0 Array)   1438436_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000090293
Ensembl peptide - ENSMUSP00000150922
Ensembl peptide - ENSMUSP00000149304
NCBI entrez gene - 67412     See in Manteia.
MGI - MGI:1914662
RefSeq - NM_026138
RefSeq - XM_006512831
RefSeq Peptide - NP_080414
swissprot - A0A1L1SUV1
swissprot - Q6NZL0
swissprot - A0A1L1SR37
Ensembl - ENSMUSG00000038916
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-197l9.2ENSDARG00000078244Danio rerio
 Q5TF21ENSG00000255330Homo sapiens
 SOGA3ENSG00000214338Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Mtcl1 / Q3UHU5 / Microtubule cross-linking factor 1 / Q9Y4B5* / microtubule crosslinking factor 1*ENSMUSG0000005210543
Soga1 / suppressor of glucose, autophagy associated 1 / O94964*ENSMUSG0000005548532
AC153912.1ENSMUSG000001107233


Protein motifs (from Interpro)
Interpro ID Name
 IPR027881  Protein SOGA


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0010506 regulation of autophagy IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr