ENSMUSG00000055485


Mus musculus

Features
Gene ID: ENSMUSG00000055485
  
Biological name :Soga1
  
Synonyms : Soga1 / suppressor of glucose, autophagy associated 1
  
Possible biological names infered from orthology : O94964
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: H1
Gene start: 157015799
Gene end: 157079254
  
Corresponding Affymetrix probe sets: 10489092 (MoGene1.0st)   1436132_at (Mouse Genome 430 2.0 Array)   1456634_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000066556
NCBI entrez gene - 320706     See in Manteia.
MGI - MGI:2444575
RefSeq - NM_001164663
RefSeq - XM_017319023
RefSeq Peptide - NP_001158135
swissprot - A2ACV6
Ensembl - ENSMUSG00000055485
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 soga1ENSDARG00000063075Danio rerio
 SOGA1ENSGALG00000003409Gallus gallus
 SOGA1ENSG00000149639Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Mtcl1 / Q3UHU5 / Microtubule cross-linking factor 1 / Q9Y4B5* / microtubule crosslinking factor 1*ENSMUSG0000005210538
Soga3 / Q6NZL0 / Protein SOGA3 / Q5TF21* / AL096711.2* / SOGA family member 3*ENSMUSG0000003891618
AC153912.1ENSMUSG000001107231


Protein motifs (from Interpro)
Interpro ID Name
 IPR027881  Protein SOGA
 IPR027882  Domain of unknown function DUF4482


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010506 regulation of autophagy IEA
 cellular_componentGO:0005615 extracellular space IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr