ENSDARG00000063553


Danio rerio

Features
Gene ID: ENSDARG00000063553
  
Biological name :rlf
  
Synonyms : rearranged L-myc fusion / rlf
  
Possible biological names infered from orthology : Mus musculus rearranged L-myc fusion sequence (Rlf), mRNA. / Q13129
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 24590177
Gene end: 24602512
  
Corresponding Affymetrix probe sets: Dr.14686.1.S1_at (Zebrafish Array)   Dr.15042.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000087373
Ensembl peptide - ENSDARP00000146644
NCBI entrez gene - 562452     See in Manteia.
RefSeq - XM_685832
RefSeq - XM_021467415
swissprot - F1RBQ7
ZFIN ID - ZDB-GENE-050208-257
Ensembl - ENSDARG00000063553
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RLFENSGALG00000000862Gallus gallus
 RLFENSG00000117000Homo sapiens
 RlfENSMUSG00000049878Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
znf292b / zinc finger protein 292b / Q9Z2U2* / Zfp292* / ZNF292* / O60281* / zinc finger protein 292*ENSDARG0000004397323
znf292a / zinc finger protein 292a / Q9Z2U2* / Zfp292* / ZNF292* / O60281* / zinc finger protein 292*ENSDARG0000001676321
znf654 / zinc finger protein 654 / Q8IZM8* / Q9DAU9* / Zfp654*ENSDARG0000007935010


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr