ENSMUSG00000049878


Mus musculus

Features
Gene ID: ENSMUSG00000049878
  
Biological name :Rlf
  
Synonyms : Mus musculus rearranged L-myc fusion sequence (Rlf), mRNA. / Rlf
  
Possible biological names infered from orthology : Q13129 / rearranged L-myc fusion
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: D2.2
Gene start: 121145373
Gene end: 121215084
  
Corresponding Affymetrix probe sets: 10516027 (MoGene1.0st)   1427171_at (Mouse Genome 430 2.0 Array)   1439555_at (Mouse Genome 430 2.0 Array)   1446057_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000127068
Ensembl peptide - ENSMUSP00000050825
NCBI entrez gene - 109263     See in Manteia.
MGI - MGI:1924705
RefSeq - XM_017319915
RefSeq - NM_001346660
RefSeq - XM_006502656
RefSeq - XM_006502657
RefSeq - XM_006502658
RefSeq - NM_001081013
RefSeq Peptide - NP_001333589
RefSeq Peptide - NP_001074482
swissprot - E9Q532
swissprot - A2A7F4
Ensembl - ENSMUSG00000049878
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rlfENSDARG00000063553Danio rerio
 RLFENSGALG00000000862Gallus gallus
 RLFENSG00000117000Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9Z2U2 / Zfp292 / zinc finger protein 292 / O60281* / ZNF292*ENSMUSG0000003996731
Q9DAU9 / Zfp654 / zinc finger protein 654 / Q8IZM8* / ZNF654*ENSMUSG0000004714114


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015074 DNA integration ISO
 biological_processGO:0044030 regulation of DNA methylation IMP
 biological_processGO:0051276 chromosome organization ISO
 biological_processGO:0097692 histone H3-K4 monomethylation IMP
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001265 reduced body size "smaller than average body weight, height and/or length of an organism compared to controls" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:23170]
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Allelic Composition: Gfi1btm1Tmo/Gfi1btm1Tmo
Genetic Background: B6.129-Gfi1btm1Tmo

 MP:0002082 postnatal lethality "premature death anytime after postnatal day 1 to weaning age (3 weeks)" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Gfi1btm1Tmo/Gfi1btm1Tmo
Genetic Background: B6.129-Gfi1btm1Tmo

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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