ENSDARG00000067566


Danio rerio

Features
Gene ID: ENSDARG00000067566
  
Biological name :sftpbb
  
Synonyms : sftpbb / surfactant protein Bb
  
Possible biological names infered from orthology : P07988 / SFTPB / surfactant associated protein B / surfactant protein B
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 68845048
Gene end: 68876211
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000088025
NCBI entrez gene - 100001978     See in Manteia.
swissprot - B8JK19
ZFIN ID - ZDB-GENE-060526-155
Ensembl - ENSDARG00000067566
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SFTPBENSG00000168878Homo sapiens
 SftpbENSMUSG00000056370Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
psap / prosaposin / Q6NUJ1* / P07602* / PSAPL1* / Q61207* / prosaposin-like 1* / prosaposin like 1 (gene/pseudogene)*ENSDARG0000001396821
sftpba / surfactant protein Ba / SFTPB* / P07988* / surfactant protein B* / surfactant associated protein B*ENSDARG0000009470820


Protein motifs (from Interpro)
Interpro ID Name
 IPR007856  Saposin-like type B, region 1
 IPR008138  Saposin B type, region 2
 IPR008139  Saposin B type domain
 IPR008373  Saposin
 IPR011001  Saposin-like
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006665 sphingolipid metabolic process IEA
 biological_processGO:0043085 positive regulation of catalytic activity IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005764 lysosome IEA
 molecular_functionGO:0001664 G-protein coupled receptor binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008047 enzyme activator activity IBA


Pathways (from Reactome)
Pathway description
Surfactant metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000067566 sftpbb / surfactant protein Bb / SFTPB* / P07988* / surfactant protein B* / surfactant associated protein B*  / reaction / complex






 

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