ENSDARG00000068255


Danio rerio

Features
Gene ID: ENSDARG00000068255
  
Biological name :nanos3
  
Synonyms : nanos3 / nanos homolog 3
  
Possible biological names infered from orthology : Mus musculus nanos C2HC-type zinc finger 3 (Nanos3), transcript variant 2, mRNA. / nanos C2HC-type zinc finger 3 / P60323 / P60324
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 55247370
Gene end: 55248496
  
Corresponding Affymetrix probe sets: Dr.14516.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000089386
NCBI entrez gene - 140631     See in Manteia.
RefSeq - NM_131878
RefSeq Peptide - NP_571953
swissprot - Q90WW1
ZFIN ID - ZDB-GENE-011221-1
Ensembl - ENSDARG00000068255
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NANOS3ENSG00000187556Homo sapiens
 Nanos3ENSMUSG00000056155Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nanos1 / E7FDB3 / nanos homolog 1 / Q8WY41* / Q80WY3* / nanos C2HC-type zinc finger 1*ENSDARG0000010933730
nanos2 / nanos homolog 2 / P60321* / nanos C2HC-type zinc finger 2*ENSDARG0000011680227


Protein motifs (from Interpro)
Interpro ID Name
 IPR008705  Nanos/Xcat2
 IPR024161  Zinc finger, nanos-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001555 oocyte growth IMP
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0007292 female gamete generation IMP
 biological_processGO:0036099 female germ-line stem cell population maintenance IMP
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0043186 P granule IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001109 oocyte oocyte absent , abnormal
Show

 ZFA:0009288 primordial germ cell primordial germ cell mislocalised , abnormal
primordial germ cell decreased amount , abnormal
primordial germ cell apoptotic , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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