ENSDARG00000109337


Danio rerio

Features
Gene ID: ENSDARG00000109337
  
Biological name :nanos1
  
Synonyms : E7FDB3 / nanos1 / nanos homolog 1
  
Possible biological names infered from orthology : nanos C2HC-type zinc finger 1 / Q80WY3 / Q8WY41
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 5117072
Gene end: 5119497
  
Corresponding Affymetrix probe sets: Dr.3063.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000149427
NCBI entrez gene - 322903     See in Manteia.
RefSeq - NM_001305661
RefSeq Peptide - NP_001292590
swissprot - E7FDB3
ZFIN ID - ZDB-GENE-030131-1623
Ensembl - ENSDARG00000109337
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NANOS1ENSGALG00000027980Gallus gallus
 NANOS1ENSG00000188613Homo sapiens
 Nanos1ENSMUSG00000072437Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nanos3 / nanos homolog 3 / P60323* / P60324* / nanos C2HC-type zinc finger 3* / Mus musculus nanos C2HC-type zinc finger 3 (Nanos3), transcript variant 2, mRNA.*ENSDARG0000006825521
nanos2 / nanos homolog 2 / P60321* / nanos C2HC-type zinc finger 2*ENSDARG0000011680220


Protein motifs (from Interpro)
Interpro ID Name
 IPR008705  Nanos/Xcat2
 IPR024161  Zinc finger, nanos-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0007281 germ cell development IMP
 biological_processGO:0008354 germ cell migration IMP
 biological_processGO:0017148 negative regulation of translation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 cellular_componentGO:0060293 germ plasm IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0030371 translation repressor activity ISS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr