ENSDARG00000068822


Danio rerio

Features
Gene ID: ENSDARG00000068822
  
Biological name :purba
  
Synonyms : purba / purine-rich element binding protein Ba
  
Possible biological names infered from orthology : O35295 / PURB / purine rich element binding protein B / Q96QR8
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 13643167
Gene end: 13646054
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000139938
Ensembl peptide - ENSDARP00000101062
NCBI entrez gene - 564840     See in Manteia.
NCBI entrez gene - 565233     See in Manteia.
RefSeq - NM_001160159
RefSeq - NM_001128722
RefSeq Peptide - NP_001122194
RefSeq Peptide - NP_001153631
swissprot - A2BFY7
swissprot - A0A0R4IS70
ZFIN ID - ZDB-GENE-060531-100
Ensembl - ENSDARG00000068822
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PURBENSG00000146676Homo sapiens
 PurbENSMUSG00000094483Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
purbb / Q6PHK6 / purine-rich element binding protein Bb / PURB* / Q96QR8* / purine rich element binding protein B*ENSDARG0000010354684
puraa / purine-rich element binding protein Aa / PURA* / Q00577* / P42669* / purine rich element binding protein A* / Transcriptional activator protein Pur-alpha *ENSDARG0000006759167
purab / purine-rich element binding protein Ab / PURA* / Q00577* / P42669* / purine rich element binding protein A* / Transcriptional activator protein Pur-alpha *ENSDARG0000009961465
purg / purine-rich element binding protein G / Q8R4E6* / Q9UJV8* / Purine-rich element-binding protein gamma *ENSDARG0000009918748


Protein motifs (from Interpro)
Interpro ID Name
 IPR006628  Purine-rich element binding protein family
 IPR030499  Purine-rich element-binding protein beta


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr